https://xgu5.github.io/tag/hpc.html HPC Wowchemy (https://wowchemy.com)en-usFri, 23 Feb 2024 00:00:00 +0000 https://xgu5.github.io/media/icon_hu_a4f3f82829f42164.png https://xgu5.github.io/tag/hpc.html https://xgu5.github.io/project/hpc.html Fri, 23 Feb 2024 00:00:00 +0000 https://xgu5.github.io/project/hpc.html <div class="container"> <div class="row justify-content-center align-items-center"> <div class="col-md-11 text-center"> <img src="../../img/HPC/nano2.png" alt="Illustration of Nano2 HPC" class="m-0 w-100 img-fluid rounded"/> <h4 class="mt-1 mb-3">Figure 1. Overview of the Nano2 HPC system.</h4> </div> </div> <p class="text-start"> During my master's program at Southern University, I designed and built the Nano2 HPC system for <a target="_blank" rel="noopener noreferrer" href="https://www.subr.edu/page/dr-shizhong-yang-computer-science">Dr. Shizhong Yang</a>'s research group, supporting their work in computational materials science, biomedical computing, machine learning, and high-temperature, high-pressure experiments. I have continued to oversee and maintain the system ever since. Key frameworks used in this project: </p> <b> <ul> <li>OpenHPC 2 with Rocky Linux 8 and Warewulf 4</li> <li>Slurm Workload Manager</li> <li>OpenMP and Intel One API (Intel Parallel Studio)</li> <li>VASP, LAMMPS, XtalOpt, MedeA, and FitSNAP</li> </ul> </b> <p class="text-start"> <p>Check out <a target="_blank" rel="noopener noreferrer" href="https://special-ace-quetzal.ngrok-free.app/grafana/d/xfpJB9FGz">Nano2</a> (monitoring with <b>Prometheus</b> and GUI with <b>Grafana</b>, network forwarding with <b>Ngrok</b>). Before Nano2, I also have experience with <b>Rocks Cluster</b> 6 and 7.</p> </p> </div>